Source code for vivarium.data.proteins

from vivarium.library.datum import Datum

class Protein(Datum):
    defaults = {
        'id': '',
        'sequence': ''}

    def __init__(self, config):
        super(Protein, self).__init__(config)

GFP = Protein({
    'id': 'GFP',
    'sequence': 'MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFSYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITHGMDELYK'})