vivarium.data.amino_acids module

vivarium.data.amino_acids.amino_acid_records = [{'name': 'Alanine', 'abbreviation': 'Ala', 'symbol': 'A'}, {'name': 'Arginine', 'abbreviation': 'Arg', 'symbol': 'R'}, {'name': 'Asparagine', 'abbreviation': 'Asn', 'symbol': 'N'}, {'name': 'Aspartate', 'abbreviation': 'Asp', 'symbol': 'D'}, {'name': 'Cysteine', 'abbreviation': 'Cys', 'symbol': 'C'}, {'name': 'Glutamate', 'abbreviation': 'Glu', 'symbol': 'E'}, {'name': 'Glutamine', 'abbreviation': 'Gln', 'symbol': 'Q'}, {'name': 'Glycine', 'abbreviation': 'Gly', 'symbol': 'G'}, {'name': 'Histidine', 'abbreviation': 'His', 'symbol': 'H'}, {'name': 'Isoleucine', 'abbreviation': 'Ile', 'symbol': 'I'}, {'name': 'Leucine', 'abbreviation': 'Leu', 'symbol': 'L'}, {'name': 'Lysine', 'abbreviation': 'Lys', 'symbol': 'K'}, {'name': 'Methionine', 'abbreviation': 'Met', 'symbol': 'M'}, {'name': 'Phenylalanine', 'abbreviation': 'Phe', 'symbol': 'F'}, {'name': 'Proline', 'abbreviation': 'Pro', 'symbol': 'P'}, {'name': 'Serine', 'abbreviation': 'Ser', 'symbol': 'S'}, {'name': 'Threonine', 'abbreviation': 'Thr', 'symbol': 'T'}, {'name': 'Tryptophan', 'abbreviation': 'Trp', 'symbol': 'W'}, {'name': 'Tyrosine', 'abbreviation': 'Tyr', 'symbol': 'Y'}, {'name': 'Valine', 'abbreviation': 'Val', 'symbol': 'V'}]

List of dictionaries, one for each amino acid. Each dictionary has keys name, abbreviation, and symbol.

vivarium.data.amino_acids.amino_acids = {'A': 'Alanine', 'C': 'Cysteine', 'D': 'Aspartate', 'E': 'Glutamate', 'F': 'Phenylalanine', 'G': 'Glycine', 'H': 'Histidine', 'I': 'Isoleucine', 'K': 'Lysine', 'L': 'Leucine', 'M': 'Methionine', 'N': 'Asparagine', 'P': 'Proline', 'Q': 'Glutamine', 'R': 'Arginine', 'S': 'Serine', 'T': 'Threonine', 'V': 'Valine', 'W': 'Tryptophan', 'Y': 'Tyrosine'}

Map from amino acid symbol to the amino acid name