vivarium.library.flux_conversion module

vivarium.library.flux_conversion.counts_to_millimolar(counts, volume)

input:

counts – list volume – list (L)

Returns

fluxes – list (molar)

vivarium.library.flux_conversion.counts_to_molar(counts, volume)

input:

counts – list volume – list (L)

Returns

fluxes – list (molar)

vivarium.library.flux_conversion.millimolar_to_counts(fluxes, volume)

input:

fluxes – list (millimolar) volume – list (L)

Returns

counts – list

vivarium.library.flux_conversion.molar_to_counts(fluxes, volume)

input:

fluxes – list (molar) volume – list (L)

Returns

counts – list

vivarium.library.flux_conversion.molar_to_molDCWhr(fluxes, dry_mass, cell_mass, density, timestep)

input:

flux: mmol/L dry_mass: fg cell_mass: fg density: timestep: seconds

Returns

fluxes in mol/gDCW/hr