vivarium.processes.minimal_expression module

class vivarium.processes.minimal_expression.MinimalExpression(initial_parameters=None)[source]

Bases: vivarium.core.process.Process

a minimal protein expression process. TO BE USED ONLY AS TRAINING WHEELS

Parameters

expression_rates (dict) – probability_of_expression (1/sec)}

defaults = {'concentrations_deriver_key': 'concentrations_deriver', 'regulation': {}, 'step_size': 1}
derivers()[source]
name = 'minimal_expression'
next_update(timestep, states)[source]
ports_schema()[source]
vivarium.processes.minimal_expression.get_toy_expression_config()[source]
vivarium.processes.minimal_expression.test_expression(end_time=10)[source]